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  5. Potri.006G252000

Potri.006G252000


Description : Alba DNA/RNA-binding protein


Gene families : OG_42_0000995 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000995_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.006G252000
Cluster HCCA clusters: cluster_0098

Target Alias Description ECC score Gene Family Method Actions
At1g29250 No alias Alba DNA/RNA-binding protein [Source:UniProtKB/TrEMBL;Acc:Q9LP53] 0.05 Orthogroups_2024-Update
Brara.G00772.1 No alias R-loop reader protein *(ALBA1/2) 0.03 Orthogroups_2024-Update
Brara.H01960.1 No alias R-loop reader protein *(ALBA1/2) 0.07 Orthogroups_2024-Update
Brara.I02904.1 No alias R-loop reader protein *(ALBA1/2) 0.03 Orthogroups_2024-Update
GRMZM2G098335 No alias Alba DNA/RNA-binding protein 0.03 Orthogroups_2024-Update
Glyma.08G211200 No alias Alba DNA/RNA-binding protein 0.04 Orthogroups_2024-Update
HORVU6Hr1G037940.3 No alias R-loop reader protein *(ALBA1/2) 0.05 Orthogroups_2024-Update
PSME_00002982-RA No alias (at1g29250 : 174.0) Alba DNA/RNA-binding protein;... 0.04 Orthogroups_2024-Update
PSME_00030199-RA No alias (at1g29250 : 177.0) Alba DNA/RNA-binding protein;... 0.02 Orthogroups_2024-Update
Seita.4G223700.1 No alias R-loop reader protein *(ALBA1/2) 0.08 Orthogroups_2024-Update
Sobic.010G184000.1 No alias R-loop reader protein *(ALBA1/2) 0.04 Orthogroups_2024-Update
evm.model.contig_4411.1 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
evm.model.tig00000383.54 No alias (at1g29250 : 112.0) Alba DNA/RNA-binding protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002775 DNA/RNA-bd_Alba-like 28 84
No external refs found!