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  5. Potri.006G253601

Potri.006G253601


Description : Rhamnogalacturonate lyase family protein


Gene families : OG_42_0000589 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000589_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.006G253601
Cluster HCCA clusters: cluster_0184

Target Alias Description ECC score Gene Family Method Actions
Glyma.06G092900 No alias Rhamnogalacturonate lyase family protein 0.03 Orthogroups_2024-Update
Glyma.08G275500 No alias Rhamnogalacturonate lyase family protein 0.03 Orthogroups_2024-Update
Glyma.09G201300 No alias Rhamnogalacturonate lyase family protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G010870.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os08g44020 No alias rhamnogalacturonate lyase, putative, expressed 0.03 Orthogroups_2024-Update
Seita.7G310700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G129700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc11g011280 No alias Rhamnogalacturonate lyase family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen04g030360 No alias Rhamnogalacturonate lyase family 0.03 Orthogroups_2024-Update
Sopen04g030370 No alias Rhamnogalacturonate lyase family 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR029411 RG-lyase_III 16 167
No external refs found!