Potri.006G256300

Description : FAR1-related sequence 6

Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.006G256300
Cluster	HCCA clusters: cluster_0075

Target	Alias	Description	ECC score	Gene Family Method
Bradi4g16767	No alias	FAR1-related sequence 5	0.02	Orthogroups_2024-Update
GRMZM2G106653	No alias	FAR1-related sequence 6	0.02	Orthogroups_2024-Update
Glyma.14G043900	No alias	FAR1-related sequence 3	0.03	Orthogroups_2024-Update
Glyma.18G179400	No alias	FAR1-related sequence 5	0.03	Orthogroups_2024-Update
Glyma.20G132100	No alias	FRS (FAR1 Related Sequences) transcription factor family	0.05	Orthogroups_2024-Update
LOC_Os11g14020	No alias	transposon protein, putative, unclassified, expressed	0.02	Orthogroups_2024-Update
Solyc06g065940	No alias	Far1-related sequence 6-like protein (AHRD V3.3 -...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004330	FAR1_DNA_bnd_dom	59	143
IPR018289	MULE_transposase_dom	266	351
IPR007527	Znf_SWIM	556	585

External Links

No external refs found!