Potri.007G014300

Description : Histone superfamily protein

Gene families : OG_42_0000090 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.007G014300
Cluster	HCCA clusters: cluster_0150

Target	Alias	Description	ECC score	Gene Family Method
Mp7g10730.1	No alias	histone (H3)	0.02	Orthogroups_2024-Update
Potri.005G235700	No alias	Histone superfamily protein	0.03	Orthogroups_2024-Update
Sopen01g039400	No alias	Core histone H2A/H2B/H3/H4	0.03	Orthogroups_2024-Update
Sopen05g029910	No alias	Core histone H2A/H2B/H3/H4	0.02	Orthogroups_2024-Update
Sopen11g005010	No alias	Core histone H2A/H2B/H3/H4	0.02	Orthogroups_2024-Update
evm.model.tig00020960.54	No alias	(at5g10980 : 159.0) Histone superfamily protein;...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	InterProScan predictions
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044427	chromosomal part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007125	Histone_H2A/H2B/H3	1	132

External Links

No external refs found!