Description : PPR repeat
Gene families : OG_42_0000146 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000146_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Sopen12g010730 | |
Cluster | HCCA clusters: Cluster_29 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
402120 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
420704 | No alias | PENTATRICOPEPTIDE REPEAT 596 | 0.05 | Orthogroups_2024-Update | |
421992 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
444770 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
At1g02370 | No alias | Pentatricopeptide repeat-containing protein At1g02370,... | 0.06 | Orthogroups_2024-Update | |
At1g15480 | No alias | Pentatricopeptide repeat-containing protein At1g15480,... | 0.04 | Orthogroups_2024-Update | |
At1g80270 | No alias | PPR596 [Source:UniProtKB/TrEMBL;Acc:A0A178W3Z6] | 0.07 | Orthogroups_2024-Update | |
At2g20710 | No alias | Pentatricopeptide repeat-containing protein At2g20710,... | 0.02 | Orthogroups_2024-Update | |
At3g15590 | No alias | Pentatricopeptide repeat-containing protein At3g15590,... | 0.04 | Orthogroups_2024-Update | |
At4g01990 | No alias | Pentatricopeptide repeat-containing protein At4g01990,... | 0.07 | Orthogroups_2024-Update | |
At5g09450 | No alias | Pentatricopeptide repeat-containing protein At5g09450,... | 0.03 | Orthogroups_2024-Update | |
Bradi1g49750 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.07 | Orthogroups_2024-Update | |
Bradi2g10850 | No alias | PENTATRICOPEPTIDE REPEAT 596 | 0.04 | Orthogroups_2024-Update | |
Bradi2g11510 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
Bradi3g30090 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Bradi3g30100 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Bradi4g06130 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Brara.C02834.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
Brara.F01064.1 | No alias | RNA editing factor *(POCO) | 0.09 | Orthogroups_2024-Update | |
Brara.G02029.1 | No alias | RNA editing factor *(POCO) | 0.1 | Orthogroups_2024-Update | |
GRMZM2G131817 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.02G000600 | No alias | PENTATRICOPEPTIDE REPEAT 596 | 0.06 | Orthogroups_2024-Update | |
Glyma.02G011200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.08G283500 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.10G000600 | No alias | PENTATRICOPEPTIDE REPEAT 596 | 0.07 | Orthogroups_2024-Update | |
Glyma.12G203800 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.19G129900 | No alias | PENTATRICOPEPTIDE REPEAT 596 | 0.04 | Orthogroups_2024-Update | |
HORVU2Hr1G093220.6 | No alias | splicing factor *(CRR16) | 0.02 | Orthogroups_2024-Update | |
HORVU2Hr1G120330.3 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
HORVU3Hr1G040710.1 | No alias | RNA editing factor *(POCO) | 0.04 | Orthogroups_2024-Update | |
HORVU7Hr1G011310.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
LOC_Os01g19490 | No alias | pentatricopeptide, putative, expressed | 0.03 | Orthogroups_2024-Update | |
MA_492314g0010 | No alias | (at1g80270 : 290.0) PENTATRICOPEPTIDE REPEAT 596... | 0.02 | Orthogroups_2024-Update | |
Potri.013G132700 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.013G133000 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
Potri.016G036100 | No alias | PENTATRICOPEPTIDE REPEAT 596 | 0.04 | Orthogroups_2024-Update | |
Potri.016G063400 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
Potri.018G079600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Pp1s19_69V6 | No alias | F5I6.2; DNA-binding protein, putative [Arabidopsis thaliana] | 0.02 | Orthogroups_2024-Update | |
Seita.2G083900.1 | No alias | RNA editing factor *(POCO) | 0.05 | Orthogroups_2024-Update | |
Seita.4G018800.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
Seita.5G038700.1 | No alias | RNA editing factor *(POCO) | 0.07 | Orthogroups_2024-Update | |
Sobic.001G203600.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.002G078100.1 | No alias | RNA editing factor *(POCO) | 0.04 | Orthogroups_2024-Update | |
Sobic.003G134000.2 | No alias | RNA editing factor *(POCO) | 0.05 | Orthogroups_2024-Update | |
Sobic.003G144000.1 | No alias | Unknown function | 0.11 | Orthogroups_2024-Update | |
Sobic.010G018900.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
Solyc01g079320 | No alias | Pentatricopeptide repeat-containing protein, putative... | 0.07 | Orthogroups_2024-Update | |
Solyc01g089870 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.03 | Orthogroups_2024-Update | |
Solyc06g005140 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.1 | Orthogroups_2024-Update | |
Solyc11g006380 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.12 | Orthogroups_2024-Update | |
Solyc12g020050 | No alias | DNA-binding protein DQ117941 | 0.05 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |