1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.007G067500

Potri.007G067500


Description : related to ubiquitin 1


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.007G067500
Cluster HCCA clusters: cluster_0091

Target Alias Description ECC score Gene Family Method Actions
270468 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
At4g02890 No alias Polyubiquitin 14 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7T8] 0.03 Orthogroups_2024-Update
At4g05050 No alias Polyubiquitin [Source:UniProtKB/TrEMBL;Acc:Q8H0Y0] 0.03 Orthogroups_2024-Update
At4g05320 No alias Polyubiquitin 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8H159] 0.03 Orthogroups_2024-Update
Bradi1g32460 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
Bradi1g32700 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
Bradi3g04730 No alias polyubiquitin 10 0.04 Orthogroups_2024-Update
Bradi3g52300 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
Brara.F02490.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Brara.G00545.1 No alias RUB ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Cre12.g491400 No alias related to ubiquitin 1 0.01 Orthogroups_2024-Update
Glyma.06G133600 No alias Ubiquitin supergroup;Ribosomal protein L40e 0.04 Orthogroups_2024-Update
HORVU3Hr1G110900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G019590.12 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G014970.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G020140.6 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G026200.5 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G026260.1 No alias UBQ ubiquitin-fold protein 0.05 Orthogroups_2024-Update
HORVU7Hr1G103330.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
MA_100402g0010 No alias (at4g02890 : 582.0) Polyubiquitin gene containing 4... 0.03 Orthogroups_2024-Update
MA_13121g0010 No alias (at5g03240 : 264.0) encodes ubiquitin that is attached... 0.03 Orthogroups_2024-Update
Mp4g02730.1 No alias ubiquitin-fold protein (UBQ) 0.03 Orthogroups_2024-Update
Potri.001G025300 No alias ubiquitin 6 0.03 Orthogroups_2024-Update
Pp1s4_496V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.1G078900.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Seita.2G207500.1 No alias RUB ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Sobic.003G403700.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Sobic.004G273300.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Sobic.010G223600.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Solyc06g053210 No alias Ubiquitin (AHRD V3.3 *** J7G5B5_ROSRU) 0.03 Orthogroups_2024-Update
Solyc10g006480 No alias Polyubiquitin (AHRD V3.3 *** UBI1P_NICSY) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 7 69
IPR000626 Ubiquitin_dom 74 145
No external refs found!