Potri.007G085500

Description : pentatricopeptide (PPR) repeat-containing protein

Gene families : OG_42_0009240 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009240_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.007G085500
Cluster	HCCA clusters: cluster_0106

Target	Alias	Description	ECC score	Gene Family Method	Actions
Seita.9G072300.1	No alias	Unknown function	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR032867	DYW_dom	652	775
IPR002885	Pentatricopeptide_repeat	109	156
IPR002885	Pentatricopeptide_repeat	478	524
IPR002885	Pentatricopeptide_repeat	375	421
IPR002885	Pentatricopeptide_repeat	213	241
IPR002885	Pentatricopeptide_repeat	51	75
IPR002885	Pentatricopeptide_repeat	618	647
IPR002885	Pentatricopeptide_repeat	552	577
IPR002885	Pentatricopeptide_repeat	80	105
IPR002885	Pentatricopeptide_repeat	184	209
IPR002885	Pentatricopeptide_repeat	243	270
IPR002885	Pentatricopeptide_repeat	348	373

External Links

No external refs found!