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  5. Potri.007G113800

Potri.007G113800


Description : AGAMOUS-like 62


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.007G113800
Cluster HCCA clusters: cluster_0076

Target Alias Description ECC score Gene Family Method Actions
A4A49_19521 No alias developmental protein sepallata 1 0.03 Orthogroups_2024-Update
At3g30260 No alias AGAMOUS-like 79 [Source:UniProtKB/TrEMBL;Acc:Q7X9H6] 0.03 Orthogroups_2024-Update
Glyma.03G019300 No alias AGAMOUS-like 20 0.03 Orthogroups_2024-Update
LOC_Os09g32948 No alias OsMADS8 - MADS-box family gene with MIKCc type-box, expressed 0.03 Orthogroups_2024-Update
Potri.009G055700 No alias AGAMOUS-like 15 0.04 Orthogroups_2024-Update
Solyc01g087990 No alias MADS-box transcription factor AGAMOUS-like protein (AHRD... 0.03 Orthogroups_2024-Update
Sopen08g021160 No alias SRF-type transcription factor (DNA-binding and... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 15 62
No external refs found!