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  5. Potri.007G116300

Potri.007G116300


Description : RNA-binding KH domain-containing protein


Gene families : OG_42_0000643 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000643_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.007G116300
Cluster HCCA clusters: cluster_0120

Target Alias Description ECC score Gene Family Method Actions
A4A49_12665 No alias kh domain-containing protein 0.03 Orthogroups_2024-Update
Bradi4g34220 No alias RNA-binding KH domain-containing protein 0.02 Orthogroups_2024-Update
Glyma.15G058400 No alias RNA-binding KH domain-containing protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G049680.1 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_6622g0010 No alias (at5g46190 : 163.0) RNA-binding KH domain-containing... 0.03 Orthogroups_2024-Update
MA_7865380g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Solyc02g088120 No alias RNA-binding KH domain protein (AHRD V3.3 *-* G7KKX1_MEDTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 315 366
IPR004088 KH_dom_type_1 164 221
IPR004088 KH_dom_type_1 407 474
IPR004088 KH_dom_type_1 61 111
IPR004088 KH_dom_type_1 684 747
No external refs found!