Potri.007G138800

Description : squamosa promoter binding protein-like 4

Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.007G138800
Cluster	HCCA clusters: cluster_0054

Target	Alias	Description	ECC score	Gene Family Method
Brara.F03810.1	No alias	SBP-type transcription factor	0.03	Orthogroups_2024-Update
Brara.G01764.1	No alias	SBP-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G148467	No alias	squamosa promoter binding protein-like 10	0.02	Orthogroups_2024-Update
GRMZM5G806833	No alias	Function unknown	0.03	Orthogroups_2024-Update
Glyma.04G197100	No alias	Squamosa promoter-binding protein-like (SBP domain)...	0.03	Orthogroups_2024-Update
Glyma.13G237400	No alias	squamosa promoter binding protein-like 3	0.03	Orthogroups_2024-Update
Glyma.13G274900	No alias	squamosa promoter-binding protein-like 12	0.03	Orthogroups_2024-Update
Glyma.17G080700	No alias	Squamosa promoter-binding protein-like (SBP domain)...	0.03	Orthogroups_2024-Update
MA_3179g0020	No alias	(at1g02065 : 176.0) Encodes an SBP-box gene, a member of...	0.02	Orthogroups_2024-Update
PSME_00047223-RA	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
Pp1s194_53V6	No alias	squamosa promoter binding protein 3	0.03	Orthogroups_2024-Update
Pp1s252_40V6	No alias	squamosa promoter-binding	0.02	Orthogroups_2024-Update
Seita.3G022100.1	No alias	SBP-type transcription factor	0.04	Orthogroups_2024-Update
Solyc02g077920	No alias	Colorless non-ripening	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	77	150

External Links

No external refs found!