Potri.008G004300

Description : pumilio 5

Gene families : OG_42_0003031 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003031_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.008G004300
Cluster	HCCA clusters: cluster_0047

Target	Alias	Description	ECC score	Gene Family Method
Glyma.15G163900	No alias	pumilio 5	0.03	Orthogroups_2024-Update
PSME_00021504-RA	No alias	(at2g29200 : 236.0) Encodes a member of the Arabidopsis...	0.03	Orthogroups_2024-Update
Potri.003G009900	No alias	pumilio 6	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001313	Pumilio_RNA-bd_rpt	736	766
IPR001313	Pumilio_RNA-bd_rpt	847	879
IPR001313	Pumilio_RNA-bd_rpt	780	805
IPR001313	Pumilio_RNA-bd_rpt	701	731
IPR001313	Pumilio_RNA-bd_rpt	926	956
IPR001313	Pumilio_RNA-bd_rpt	667	698
IPR001313	Pumilio_RNA-bd_rpt	809	841
IPR001313	Pumilio_RNA-bd_rpt	882	914
IPR012940	NABP	332	663

External Links

No external refs found!