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  5. Potri.008G019000

Potri.008G019000


Description : RING/U-box superfamily protein


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.008G019000
Cluster HCCA clusters: cluster_0138

Target Alias Description ECC score Gene Family Method Actions
At1g22500 No alias E3 ubiquitin-protein ligase ATL15... 0.03 Orthogroups_2024-Update
At4g15975 No alias RING/U-box superfamily protein [Source:TAIR;Acc:AT4G15975] 0.04 Orthogroups_2024-Update
Brara.A00916.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Glyma.15G173800 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
HORVU0Hr1G016510.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU1Hr1G069670.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU4Hr1G082740.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os02g58540 No alias RING-H2 finger protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os03g57410 No alias RING-H2 finger protein ATL5D, putative, expressed 0.03 Orthogroups_2024-Update
Pp1s102_105V6 No alias ring finger 0.04 Orthogroups_2024-Update
Seita.1G270700.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Seita.7G205000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.7G218600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc11g005300 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G49230.1) 0.03 Orthogroups_2024-Update
Solyc11g066510 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT2G27940.1) 0.03 Orthogroups_2024-Update
Sopen04g029750 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen11g001290 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 102 145
No external refs found!