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  5. Potri.008G075900

Potri.008G075900


Description : dicer-like 2


Gene families : OG_42_0000292 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000292_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.008G075900
Cluster HCCA clusters: cluster_0001

Target Alias Description ECC score Gene Family Method Actions
Bradi3g29287 No alias dicer-like 3 0.03 Orthogroups_2024-Update
PSME_00034422-RA No alias (at1g01040 : 527.0) Encodes a Dicer homolog. Dicer is a... 0.03 Orthogroups_2024-Update
Solyc06g048960 No alias Dicer-like 2a 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0004525 ribonuclease III activity IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006396 RNA processing IEA InterProScan predictions
MF GO:0016787 hydrolase activity IEA InterProScan predictions
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005034 Dicer_dimerisation_dom 561 639
IPR000999 RNase_III_dom 1191 1302
IPR000999 RNase_III_dom 1001 1119
IPR014720 dsRBD_dom 1329 1393
IPR003100 PAZ_dom 834 958
IPR001650 Helicase_C 373 492
IPR006935 Helicase/UvrB_N 23 190
No external refs found!