Potri.008G098500

Description : K-box region and MADS-box transcription factor family protein

Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.008G098500
Cluster	HCCA clusters: cluster_0179

Target	Alias	Description	ECC score	Gene Family Method
At4g11880	No alias	Agamous-like MADS-box protein AGL14...	0.03	Orthogroups_2024-Update
Bradi2g57000	No alias	K-box region and MADS-box transcription factor family protein	0.02	Orthogroups_2024-Update
Brara.B03164.1	No alias	regulatory protein *(SEPALLATA) of floral meristem...	0.03	Orthogroups_2024-Update
Brara.G02489.1	No alias	regulatory protein *(AP1/CAL/FUL) of floral meristem...	0.03	Orthogroups_2024-Update
Brara.K00360.1	No alias	MADS/AGL-type transcription factor	0.04	Orthogroups_2024-Update
HORVU0Hr1G032300.1	No alias	regulatory protein *(SEPALLATA) of floral meristem...	0.03	Orthogroups_2024-Update
HORVU6Hr1G066140.9	No alias	regulatory protein *(SEPALLATA) of floral meristem...	0.03	Orthogroups_2024-Update
LOC_Os01g69850	No alias	OsMADS65 - MADS-box family gene with MIKC* type-box, expressed	0.02	Orthogroups_2024-Update
LOC_Os08g41950	No alias	OsMADS7 - MADS-box family gene with MIKCc type-box, expressed	0.03	Orthogroups_2024-Update
MA_35712g0010	No alias	(at4g11880 : 102.0) AGL12, AGL14, and AGL17 are all...	0.04	Orthogroups_2024-Update
Potri.002G079000	No alias	K-box region and MADS-box transcription factor family protein	0.04	Orthogroups_2024-Update
Potri.008G041500	No alias	AGAMOUS-like 62	0.03	Orthogroups_2024-Update
Seita.1G209300.1	No alias	MADS/AGL-type transcription factor	0.02	Orthogroups_2024-Update
Seita.1G273400.1	No alias	regulatory protein *(SEPALLATA) of floral meristem...	0.03	Orthogroups_2024-Update
Seita.3G098400.1	No alias	MADS/AGL-type transcription factor	0.02	Orthogroups_2024-Update
Seita.3G280400.1	No alias	MADS/AGL-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.007G192900.1	No alias	MADS/AGL-type transcription factor	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002487	TF_Kbox	86	172
IPR002100	TF_MADSbox	10	57

External Links

No external refs found!

Potri.008G098500

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation