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  5. Potri.008G101100

Potri.008G101100


Description : ribosomal protein S1


Gene families : OG_42_0004607 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004607_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.008G101100
Cluster HCCA clusters: cluster_0030

Target Alias Description ECC score Gene Family Method Actions
271018 No alias ribosomal protein S1 0.02 Orthogroups_2024-Update
Bradi1g64130 No alias ribosomal protein S1 0.08 Orthogroups_2024-Update
Brara.F02917.1 No alias component *(bS1c) of small plastid ribosomal-subunit proteome 0.03 Orthogroups_2024-Update
Brara.I00435.1 No alias component *(bS1c) of small plastid ribosomal-subunit proteome 0.03 Orthogroups_2024-Update
Cre09.g394750 No alias ribosomal protein S1 0.04 Orthogroups_2024-Update
GRMZM5G862107 No alias ribosomal protein S1 0.04 Orthogroups_2024-Update
Glyma.17G037700 No alias ribosomal protein S1 0.03 Orthogroups_2024-Update
Kfl00026_0040 kfl00026_0040_v1.1 (p29344|rr1_spiol : 344.0) 30S ribosomal protein S1,... 0.03 Orthogroups_2024-Update
LOC_Os03g20100 No alias S1 RNA binding domain containing protein, expressed 0.05 Orthogroups_2024-Update
MA_694512g0010 No alias (p29344|rr1_spiol : 262.0) 30S ribosomal protein S1,... 0.07 Orthogroups_2024-Update
PSME_00004027-RA No alias (p29344|rr1_spiol : 395.0) 30S ribosomal protein S1,... 0.04 Orthogroups_2024-Update
Pp1s32_313V6 No alias 30s ribosomal protein s1 0.02 Orthogroups_2024-Update
Pp1s40_14V6 No alias 30s ribosomal protein s1 0.06 Orthogroups_2024-Update
Seita.9G425000.1 No alias component *(bS1c) of small plastid ribosomal-subunit proteome 0.06 Orthogroups_2024-Update
Sobic.001G391400.1 No alias component *(bS1c) of small plastid ribosomal-subunit proteome 0.04 Orthogroups_2024-Update
Sopen01g023160 No alias S1 RNA binding domain 0.05 Orthogroups_2024-Update
evm.model.tig00000241.13 No alias (p29344|rr1_spiol : 291.0) 30S ribosomal protein S1,... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003029 S1_domain 198 268
IPR003029 S1_domain 122 185
IPR003029 S1_domain 33 105
No external refs found!