1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.008G140400

Potri.008G140400


Description : C2H2-like zinc finger protein


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.008G140400
Cluster HCCA clusters: cluster_0011

Target Alias Description ECC score Gene Family Method Actions
Brara.B03088.1 No alias C2H2 subclass IDD transcription factor 0.02 Orthogroups_2024-Update
Brara.G02764.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Brara.I05524.1 No alias C2H2 subclass IDD transcription factor 0.04 Orthogroups_2024-Update
Glyma.04G033300 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Glyma.07G158200 No alias indeterminate(ID)-domain 4 0.03 Orthogroups_2024-Update
Glyma.20G184000 No alias indeterminate(ID)-domain 4 0.05 Orthogroups_2024-Update
LOC_Os09g38340 No alias ZOS9-17 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
PSME_00020819-RA No alias (at2g01940 : 340.0) May be involved in an early event in... 0.02 Orthogroups_2024-Update
Seita.1G175100.1 No alias C2H2 subclass IDD transcription factor 0.01 Orthogroups_2024-Update
Seita.2G303400.1 No alias C2H2 subclass IDD transcription factor 0.02 Orthogroups_2024-Update
Solyc06g075250 No alias Zinc finger family protein (AHRD V3.3 *** S8C619_9LAMI) 0.03 Orthogroups_2024-Update
Solyc11g069240 No alias Zinc finger family protein (AHRD V3.3 *** S8C619_9LAMI) 0.02 Orthogroups_2024-Update
Sopen10g033630 No alias Zinc finger, C2H2 type 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 58 80
No external refs found!