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  5. Solyc03g005320

Solyc03g005320


Description : 3-ketoacyl-CoA synthase (AHRD V3.3 *** M1A6B6_SOLTU)


Gene families : OG_42_0000099 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g005320
Cluster HCCA clusters: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
A4A49_04047 No alias 3-ketoacyl-coa synthase 6 0.03 Orthogroups_2024-Update
A4A49_29650 No alias 3-ketoacyl-coa synthase 10 0.04 Orthogroups_2024-Update
At4g34250 No alias 3-ketoacyl-CoA synthase 16... 0.03 Orthogroups_2024-Update
Brara.D01590.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.03 Orthogroups_2024-Update
Brara.I04736.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.03 Orthogroups_2024-Update
GRMZM2G104626 No alias 3-ketoacyl-CoA synthase 1 0.02 Orthogroups_2024-Update
Glyma.06G058500 No alias 3-ketoacyl-CoA synthase 10 0.05 Orthogroups_2024-Update
Glyma.10G291700 No alias 3-ketoacyl-CoA synthase 19 0.04 Orthogroups_2024-Update
Glyma.14G074300 No alias 3-ketoacyl-CoA synthase 4 0.03 Orthogroups_2024-Update
HORVU4Hr1G067340.2 No alias 3-ketoacyl-CoA synthase *(KCS) 0.03 Orthogroups_2024-Update
LOC_Os01g34560 No alias 3-ketoacyl-CoA synthase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g08360 No alias 3-ketoacyl-CoA synthase 10, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g49290 No alias 3-ketoacyl-CoA synthase, putative, expressed 0.03 Orthogroups_2024-Update
MA_105806g0010 No alias (at2g26640 : 701.0) Encodes KCS11, a member of the... 0.04 Orthogroups_2024-Update
MA_46113g0010 No alias (at2g26640 : 801.0) Encodes KCS11, a member of the... 0.03 Orthogroups_2024-Update
MA_759169g0010 No alias (at2g26250 : 620.0) epidermis-specific, encodes KCS10, a... 0.04 Orthogroups_2024-Update
Potri.008G160000 No alias 3-ketoacyl-CoA synthase 11 0.03 Orthogroups_2024-Update
Potri.010G125300 No alias 3-ketoacyl-CoA synthase 6 0.03 Orthogroups_2024-Update
Potri.014G104300 No alias 3-ketoacyl-CoA synthase 1 0.03 Orthogroups_2024-Update
Potri.015G133700 No alias 3-ketoacyl-CoA synthase 6 0.03 Orthogroups_2024-Update
Potri.018G032200 No alias 3-ketoacyl-CoA synthase 11 0.03 Orthogroups_2024-Update
Pp1s28_28V6 No alias beta-ketoacyl-coa synthase family protein 0.02 Orthogroups_2024-Update
Pp1s7_269V6 No alias beta-ketoacyl-coa synthase family protein 0.02 Orthogroups_2024-Update
Seita.1G123100.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.02 Orthogroups_2024-Update
Seita.3G142500.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.02 Orthogroups_2024-Update
Seita.4G225400.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.04 Orthogroups_2024-Update
Sopen09g031930 No alias FAE1/Type III polyketide synthase-like protein 0.02 Orthogroups_2024-Update
Sopen10g005030 No alias FAE1/Type III polyketide synthase-like protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016987 sigma factor activity IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR013747 ACP_syn_III_C 405 485
IPR013601 FAE1_typ3_polyketide_synth 99 387
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