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  5. Potri.008G189200

Potri.008G189200


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0002044 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002044_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Populus release: Potri.008G189200
Cluster HCCA clusters: cluster_0102

Target Alias Description ECC score Gene Family Method Actions
At3g26610 No alias Pectin lyase-like superfamily protein... 0.03 Orthogroups_2024-Update
At5g14650 No alias Pectin lyase-like superfamily protein... 0.03 Orthogroups_2024-Update
Brara.F00711.1 No alias polygalacturonase *(PGX1-like) & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.I05215.1 No alias polygalacturonase *(PGX1-like) & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
LOC_Os01g45060 No alias polygalacturonase, putative, expressed 0.03 Orthogroups_2024-Update
Potri.010G042100 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Sobic.003G232600.1 No alias EC_3.2 glycosylase & polygalacturonase *(PGX1-like) 0.03 Orthogroups_2024-Update
Sopen05g001180 No alias Glycosyl hydrolases family 28 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 132 210
IPR000743 Glyco_hydro_28 251 469
No external refs found!