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  5. Potri.008G211400

Potri.008G211400


Description : pumilio 24


Gene families : OG_42_0004039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.008G211400
Cluster HCCA clusters: cluster_0106

Target Alias Description ECC score Gene Family Method Actions
A4A49_18467 No alias pumilio-like 24 0.03 Orthogroups_2024-Update
At3g16810 No alias Pumilio homolog 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRZ3] 0.05 Orthogroups_2024-Update
Bradi1g03030 No alias pumilio 24 0.07 Orthogroups_2024-Update
Brara.E02483.1 No alias rRNA processing factor involved in ITS2 rRNA removal *(APUM24) 0.04 Orthogroups_2024-Update
Cre12.g528950 No alias pumilio 24 0.05 Orthogroups_2024-Update
HORVU5Hr1G116320.2 No alias rRNA processing factor involved in ITS2 rRNA removal *(APUM24) 0.03 Orthogroups_2024-Update
Kfl00404_0120 kfl00404_0120_v1.1 (at3g16810 : 260.0) Encodes a member of the Arabidopsis... 0.02 Orthogroups_2024-Update
Mp7g01710.1 No alias APUM24 rRNA processing factor involved in ITS2 rRNA removal 0.02 Orthogroups_2024-Update
Pp1s263_19V6 No alias kiaa0020 protein 0.05 Orthogroups_2024-Update
Seita.9G025100.1 No alias rRNA processing factor involved in ITS2 rRNA removal *(APUM24) 0.08 Orthogroups_2024-Update
Sobic.001G024000.1 No alias rRNA processing factor involved in ITS2 rRNA removal *(APUM24) 0.06 Orthogroups_2024-Update
Solyc01g065580 No alias Pumilio-like protein (AHRD V3.3 *** A0A0B0MGW0_GOSAR) 0.08 Orthogroups_2024-Update
Sopen01g026980 No alias Pumilio-family RNA binding repeat 0.07 Orthogroups_2024-Update
evm.model.contig_516.2 No alias (gnl|cdd|68872 : 113.0) no description available &... 0.04 Orthogroups_2024-Update
evm.model.tig00000615.61 No alias (at3g16810 : 157.0) Encodes a member of the Arabidopsis... 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012959 CPL_dom 485 588
No external refs found!