Potri.008G217000

Description : Tetratricopeptide repeat (TPR)-like superfamily protein

Gene families : OG_42_0015311 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0015311_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.008G217000
Cluster	HCCA clusters: cluster_0059

Target	Alias	Description	ECC score	Gene Family Method
Brara.K01189.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
MA_17489g0010	No alias	(at4g02750 : 448.0) Tetratricopeptide repeat (TPR)-like...	0.02	Orthogroups_2024-Update
PSME_00010008-RA	No alias	(at4g02750 : 466.0) Tetratricopeptide repeat (TPR)-like...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	112	136
IPR002885	Pentatricopeptide_repeat	18	39
IPR002885	Pentatricopeptide_repeat	81	110
IPR002885	Pentatricopeptide_repeat	286	306
IPR032867	DYW_dom	387	512
IPR002885	Pentatricopeptide_repeat	211	259

External Links

No external refs found!