Sopen12g014090

Description : Photosystem I psaA/psaB protein

Gene families : OG_42_0000633 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000633_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen12g014090
Cluster	HCCA clusters: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method
236842	No alias	Photosystem I, PsaA/PsaB protein	0.02	Orthogroups_2024-Update
Bradi1g39223	No alias	Photosystem I, PsaA/PsaB protein	0.02	Orthogroups_2024-Update
PSME_00007865-RA	No alias	(p41640\|psab_pinth : 787.0) Photosystem I P700...	0.04	Orthogroups_2024-Update
PSME_00023812-RA	No alias	(p58386\|psab_wheat : 347.0) Photosystem I P700...	0.04	Orthogroups_2024-Update
Seita.J011100.1	No alias	apoprotein PsaA of PS-I complex	0.04	Orthogroups_2024-Update
Seita.J019800.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Solyc02g020960	No alias	Photosystem I P700 chlorophyll a apoprotein A1 (AHRD...	0.03	Orthogroups_2024-Update
Solyc04g016170	No alias	LOW QUALITY:Photosystem I P700 chlorophyll a apoprotein...	0.06	Orthogroups_2024-Update
Solyc10g017900	No alias	Photosystem I P700 chlorophyll a apoprotein A1 family...	0.03	Orthogroups_2024-Update
Solyc12g032980	No alias	Photosystem I P700 chlorophyll a apoprotein A2 (AHRD...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009522	photosystem I	IEA	InterProScan predictions
CC	GO:0009579	thylakoid	IEA	InterProScan predictions
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	IEA	InterProScan predictions
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044436	thylakoid part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001280	PSI_PsaA/B	12	178

External Links

No external refs found!