Potri.009G005700

Description : CHY-type/CTCHY-type/RING-type Zinc finger protein

Gene families : OG_42_0001040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001040_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.009G005700
Cluster	HCCA clusters: cluster_0029

Target	Alias	Description	ECC score	Gene Family Method
At3g62970	No alias	Zinc finger (C3HC4-type RING finger) family protein...	0.03	Orthogroups_2024-Update
At5g18650	No alias	MIEL1 [Source:UniProtKB/TrEMBL;Acc:A0A178UJV2]	0.03	Orthogroups_2024-Update
At5g22920	No alias	E3 ubiquitin-protein ligase RZFP34...	0.05	Orthogroups_2024-Update
Glyma.11G192900	No alias	CHY-type/CTCHY-type/RING-type Zinc finger protein	0.03	Orthogroups_2024-Update
HORVU1Hr1G038120.1	No alias	E3 ubiquitin ligase *(CHY)	0.03	Orthogroups_2024-Update
Sobic.001G230700.1	No alias	E3 ubiquitin ligase *(CHY)	0.02	Orthogroups_2024-Update
Sobic.008G117200.1	No alias	E3 ubiquitin ligase *(CHY)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR008913	Znf_CHY	31	112
IPR027370	Znf-RING_LisH	167	207
IPR039512	RCHY1_zinc-ribbon	214	272

External Links

No external refs found!