1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.009G015000

Potri.009G015000


Description : DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain


Gene families : OG_42_0001670 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001670_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.009G015000
Cluster HCCA clusters: cluster_0074

Target Alias Description ECC score Gene Family Method Actions
Bradi2g38030 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.03 Orthogroups_2024-Update
Bradi2g62697 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.04 Orthogroups_2024-Update
Bradi4g26720 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.02 Orthogroups_2024-Update
Brara.B01042.1 No alias E3 SUMO ubiquitin ligase *(SIZ1) 0.03 Orthogroups_2024-Update
GRMZM2G155123 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.04 Orthogroups_2024-Update
HORVU1Hr1G013600.3 No alias E3 SUMO ubiquitin ligase *(SIZ1) 0.03 Orthogroups_2024-Update
Pp1s16_412V6 No alias MUF9.5; expressed protein [Arabidopsis thaliana] 0.04 Orthogroups_2024-Update
Solyc11g069160 No alias SUMO E3 ligase SIZ1 (AHRD V3.3 *** A0A0X9AQ43_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003034 SAP_dom 14 42
IPR004181 Znf_MIZ 361 409
No external refs found!