Potri.009G016100

Description : plant U-box 24

Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.009G016100
Cluster	HCCA clusters: cluster_0066

Target	Alias	Description	ECC score	Gene Family Method
416356	No alias	plant U-box 24	0.02	Orthogroups_2024-Update
426053	No alias	plant U-box 24	0.02	Orthogroups_2024-Update
A4A49_22370	No alias	u-box domain-containing protein 26	0.04	Orthogroups_2024-Update
A4A49_33780	No alias	e3 ubiquitin-protein ligase pub23	0.04	Orthogroups_2024-Update
A4A49_34426	No alias	e3 ubiquitin-protein ligase pub24	0.04	Orthogroups_2024-Update
At1g66160	No alias	U-box domain-containing protein 20...	0.04	Orthogroups_2024-Update
Bradi5g09720	No alias	plant U-box 22	0.02	Orthogroups_2024-Update
Bradi5g27660	No alias	CYS, MET, PRO, and GLY protein 2	0.02	Orthogroups_2024-Update
Brara.B01640.1	No alias	E3 ubiquitin ligase	0.02	Orthogroups_2024-Update
Brara.D00589.1	No alias	E3 ubiquitin ligase	0.05	Orthogroups_2024-Update
Brara.D01194.1	No alias	E3 ubiquitin ligase	0.03	Orthogroups_2024-Update
GRMZM2G055052	No alias	CYS, MET, PRO, and GLY protein 1	0.02	Orthogroups_2024-Update
GRMZM2G151204	No alias	CYS, MET, PRO, and GLY protein 1	0.03	Orthogroups_2024-Update
Glyma.02G102900	No alias	plant U-box 26	0.03	Orthogroups_2024-Update
Glyma.07G106000	No alias	ARM repeat superfamily protein	0.04	Orthogroups_2024-Update
LOC_Os02g34410	No alias	U-box domain-containing protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os04g35680	No alias	U-box domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_33190g0010	No alias	(at2g35930 : 324.0) Encodes a cytoplasmically localized...	0.03	Orthogroups_2024-Update
PSME_00022617-RA	No alias	(at3g52450 : 247.0) Encodes a cytoplasmically localized...	0.03	Orthogroups_2024-Update
PSME_00043995-RA	No alias	(at1g49780 : 227.0) plant U-box 26 (PUB26); FUNCTIONS...	0.07	Orthogroups_2024-Update
PSME_00048709-RA	No alias	(at2g35930 : 183.0) Encodes a cytoplasmically localized...	0.03	Orthogroups_2024-Update
PSME_00049378-RA	No alias	(at3g19380 : 185.0) plant U-box 25 (PUB25); FUNCTIONS...	0.03	Orthogroups_2024-Update
PSME_00054803-RA	No alias	(at3g52450 : 283.0) Encodes a cytoplasmically localized...	0.04	Orthogroups_2024-Update
PSME_00056516-RA	No alias	(at3g19380 : 420.0) plant U-box 25 (PUB25); FUNCTIONS...	0.04	Orthogroups_2024-Update
PSME_00056761-RA	No alias	(at3g19380 : 247.0) plant U-box 25 (PUB25); FUNCTIONS...	0.03	Orthogroups_2024-Update
Potri.002G070500	No alias	plant U-box 29	0.04	Orthogroups_2024-Update
Potri.005G189800	No alias	plant U-box 29	0.04	Orthogroups_2024-Update
Potri.006G202700	No alias	plant U-box 24	0.03	Orthogroups_2024-Update
Potri.007G110600	No alias	ARM repeat superfamily protein	0.05	Orthogroups_2024-Update
Potri.012G042600	No alias	ARM repeat superfamily protein	0.03	Orthogroups_2024-Update
Potri.017G135000	No alias	ARM repeat superfamily protein	0.03	Orthogroups_2024-Update
Seita.7G104100.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Seita.9G474100.1	No alias	E3 ubiquitin ligase	0.04	Orthogroups_2024-Update
Sobic.001G441100.1	No alias	E3 ubiquitin ligase	0.04	Orthogroups_2024-Update
Sobic.004G169200.1	No alias	E3 ubiquitin ligase	0.04	Orthogroups_2024-Update
Sobic.004G169900.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Sobic.010G102000.1	No alias	E3 ubiquitin ligase	0.04	Orthogroups_2024-Update
Solyc01g080920	No alias	LOW QUALITY:U-box domain-containing protein (AHRD V3.3...	0.05	Orthogroups_2024-Update
Solyc01g107980	No alias	U-box domain-containing family protein (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	InterProScan predictions
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	6	78

External Links

No external refs found!

Potri.009G016100

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation