Description : plant U-box 24
Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Populus release: Potri.009G016100 | |
Cluster | HCCA clusters: cluster_0066 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
416356 | No alias | plant U-box 24 | 0.02 | Orthogroups_2024-Update | |
426053 | No alias | plant U-box 24 | 0.02 | Orthogroups_2024-Update | |
A4A49_22370 | No alias | u-box domain-containing protein 26 | 0.04 | Orthogroups_2024-Update | |
A4A49_33780 | No alias | e3 ubiquitin-protein ligase pub23 | 0.04 | Orthogroups_2024-Update | |
A4A49_34426 | No alias | e3 ubiquitin-protein ligase pub24 | 0.04 | Orthogroups_2024-Update | |
At1g66160 | No alias | U-box domain-containing protein 20... | 0.04 | Orthogroups_2024-Update | |
Bradi5g09720 | No alias | plant U-box 22 | 0.02 | Orthogroups_2024-Update | |
Bradi5g27660 | No alias | CYS, MET, PRO, and GLY protein 2 | 0.02 | Orthogroups_2024-Update | |
Brara.B01640.1 | No alias | E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Brara.D00589.1 | No alias | E3 ubiquitin ligase | 0.05 | Orthogroups_2024-Update | |
Brara.D01194.1 | No alias | E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
GRMZM2G055052 | No alias | CYS, MET, PRO, and GLY protein 1 | 0.02 | Orthogroups_2024-Update | |
GRMZM2G151204 | No alias | CYS, MET, PRO, and GLY protein 1 | 0.03 | Orthogroups_2024-Update | |
Glyma.02G102900 | No alias | plant U-box 26 | 0.03 | Orthogroups_2024-Update | |
Glyma.07G106000 | No alias | ARM repeat superfamily protein | 0.04 | Orthogroups_2024-Update | |
LOC_Os02g34410 | No alias | U-box domain-containing protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os04g35680 | No alias | U-box domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
MA_33190g0010 | No alias | (at2g35930 : 324.0) Encodes a cytoplasmically localized... | 0.03 | Orthogroups_2024-Update | |
PSME_00022617-RA | No alias | (at3g52450 : 247.0) Encodes a cytoplasmically localized... | 0.03 | Orthogroups_2024-Update | |
PSME_00043995-RA | No alias | (at1g49780 : 227.0) plant U-box 26 (PUB26); FUNCTIONS... | 0.07 | Orthogroups_2024-Update | |
PSME_00048709-RA | No alias | (at2g35930 : 183.0) Encodes a cytoplasmically localized... | 0.03 | Orthogroups_2024-Update | |
PSME_00049378-RA | No alias | (at3g19380 : 185.0) plant U-box 25 (PUB25); FUNCTIONS... | 0.03 | Orthogroups_2024-Update | |
PSME_00054803-RA | No alias | (at3g52450 : 283.0) Encodes a cytoplasmically localized... | 0.04 | Orthogroups_2024-Update | |
PSME_00056516-RA | No alias | (at3g19380 : 420.0) plant U-box 25 (PUB25); FUNCTIONS... | 0.04 | Orthogroups_2024-Update | |
PSME_00056761-RA | No alias | (at3g19380 : 247.0) plant U-box 25 (PUB25); FUNCTIONS... | 0.03 | Orthogroups_2024-Update | |
Potri.002G070500 | No alias | plant U-box 29 | 0.04 | Orthogroups_2024-Update | |
Potri.005G189800 | No alias | plant U-box 29 | 0.04 | Orthogroups_2024-Update | |
Potri.006G202700 | No alias | plant U-box 24 | 0.03 | Orthogroups_2024-Update | |
Potri.007G110600 | No alias | ARM repeat superfamily protein | 0.05 | Orthogroups_2024-Update | |
Potri.012G042600 | No alias | ARM repeat superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.017G135000 | No alias | ARM repeat superfamily protein | 0.03 | Orthogroups_2024-Update | |
Seita.7G104100.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Seita.9G474100.1 | No alias | E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
Sobic.001G441100.1 | No alias | E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
Sobic.004G169200.1 | No alias | E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
Sobic.004G169900.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.010G102000.1 | No alias | E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
Solyc01g080920 | No alias | LOW QUALITY:U-box domain-containing protein (AHRD V3.3... | 0.05 | Orthogroups_2024-Update | |
Solyc01g107980 | No alias | U-box domain-containing family protein (AHRD V3.3 ***... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | InterProScan predictions |
BP | GO:0016567 | protein ubiquitination | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003613 | Ubox_domain | 6 | 78 |
No external refs found! |