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  5. Potri.009G016200

Potri.009G016200


Description : plant U-box 23


Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.009G016200
Cluster HCCA clusters: cluster_0150

Target Alias Description ECC score Gene Family Method Actions
416356 No alias plant U-box 24 0.02 Orthogroups_2024-Update
A4A49_22370 No alias u-box domain-containing protein 26 0.03 Orthogroups_2024-Update
At1g49780 No alias U-box domain-containing protein 26... 0.04 Orthogroups_2024-Update
At3g19380 No alias U-box domain-containing protein 25... 0.03 Orthogroups_2024-Update
Bradi5g09720 No alias plant U-box 22 0.03 Orthogroups_2024-Update
Bradi5g27660 No alias CYS, MET, PRO, and GLY protein 2 0.03 Orthogroups_2024-Update
Brara.A03383.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.D02179.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.E02265.1 No alias U-Box-group-III E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.E02898.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
GRMZM2G041141 No alias plant U-box 26 0.03 Orthogroups_2024-Update
GRMZM2G168980 No alias plant U-box 23 0.02 Orthogroups_2024-Update
GRMZM2G169690 No alias plant U-box 23 0.02 Orthogroups_2024-Update
GRMZM5G855994 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G196301 No alias plant U-box 24 0.03 Orthogroups_2024-Update
Glyma.07G106000 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G095100 No alias plant U-box 23 0.04 Orthogroups_2024-Update
Glyma.12G189000 No alias plant U-box 23 0.03 Orthogroups_2024-Update
Glyma.14G212200 No alias CYS, MET, PRO, and GLY protein 1 0.02 Orthogroups_2024-Update
Glyma.18G042100 No alias ARM repeat superfamily protein 0.04 Orthogroups_2024-Update
HORVU0Hr1G003810.1 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
LOC_Os02g34410 No alias U-box domain-containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g34030 No alias U-box domain-containing protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_10430196g0010 No alias (at2g35930 : 192.0) Encodes a cytoplasmically localized... 0.03 Orthogroups_2024-Update
MA_10432179g0010 No alias (at3g52450 : 121.0) Encodes a cytoplasmically localized... 0.02 Orthogroups_2024-Update
MA_415393g0010 No alias (at3g19380 : 146.0) plant U-box 25 (PUB25); FUNCTIONS... 0.02 Orthogroups_2024-Update
MA_684442g0010 No alias (at3g52450 : 140.0) Encodes a cytoplasmically localized... 0.03 Orthogroups_2024-Update
PSME_00043995-RA No alias (at1g49780 : 227.0) plant U-box 26 (PUB26); FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00048709-RA No alias (at2g35930 : 183.0) Encodes a cytoplasmically localized... 0.02 Orthogroups_2024-Update
PSME_00056652-RA No alias (at2g35930 : 195.0) Encodes a cytoplasmically localized... 0.03 Orthogroups_2024-Update
Potri.001G216100 No alias plant U-box 23 0.03 Orthogroups_2024-Update
Potri.002G070500 No alias plant U-box 29 0.03 Orthogroups_2024-Update
Potri.005G057500 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G202600 No alias plant U-box 22 0.03 Orthogroups_2024-Update
Potri.014G101100 No alias plant U-box 23 0.05 Orthogroups_2024-Update
Potri.017G135000 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Seita.7G095100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.7G104100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G169200.1 No alias E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.004G169900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.006G075400.2 No alias E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.007G101150.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.010G102000.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc01g007010 No alias U-box domain-containing family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc01g080920 No alias LOW QUALITY:U-box domain-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc04g008100 No alias U-box domain-containing protein (AHRD V3.3 *** A0A0A0RAL4_9ROSI) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
BP GO:0016567 protein ubiquitination IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003613 Ubox_domain 6 75
No external refs found!