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  5. Potri.009G028001

Potri.009G028001


Description : Histone superfamily protein


Gene families : OG_42_0000153 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000153_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.009G028001
Cluster HCCA clusters: cluster_0035

Target Alias Description ECC score Gene Family Method Actions
At5g22880 No alias Histone H2B [Source:UniProtKB/TrEMBL;Acc:Q1H5F7] 0.03 Orthogroups_2024-Update
Bradi1g56057 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g00530 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g271376 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Glyma.10G198500 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G065100 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G056530.1 No alias histone *(H2B) 0.02 Orthogroups_2024-Update
HORVU1Hr1G072190.4 No alias histone *(H2B) 0.02 Orthogroups_2024-Update
HORVU3Hr1G086610.4 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
LOC_Os01g05630 No alias Core histone H2A/H2B/H3/H4 domain containing protein,... 0.02 Orthogroups_2024-Update
LOC_Os01g05900 No alias Core histone H2A/H2B/H3/H4 domain containing protein,... 0.04 Orthogroups_2024-Update
LOC_Os09g39730 No alias Core histone H2A/H2B/H3/H4 domain containing protein,... 0.03 Orthogroups_2024-Update
PSME_00041882-RA No alias (at5g22880 : 162.0) Encodes a histone 2B (H2B) protein.... 0.02 Orthogroups_2024-Update
Pp1s34_255V6 No alias histone h2b 0.02 Orthogroups_2024-Update
Seita.5G107600.1 No alias histone *(H2B) 0.02 Orthogroups_2024-Update
Seita.6G192900.1 No alias histone *(H2B) 0.02 Orthogroups_2024-Update
Sobic.003G067300.1 No alias histone *(H2B) 0.02 Orthogroups_2024-Update
Sopen05g033890 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen06g031230 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 4 124
No external refs found!