Potri.009G034900

Description : pumilio 3

Gene families : OG_42_0001049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001049_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.009G034900
Cluster	HCCA clusters: cluster_0129

Target	Alias	Description	ECC score	Gene Family Method
86145	No alias	pumilio 1	0.02	Orthogroups_2024-Update
Glyma.11G136700	No alias	pumilio 2	0.03	Orthogroups_2024-Update
Pp1s96_110V6	No alias	pumilio domain-containing protein ppd1	0.02	Orthogroups_2024-Update
Solyc04g011580	No alias	Pumilio, putative (AHRD V3.3 *** B9SDY2_RICCO)	0.03	Orthogroups_2024-Update
evm.model.tig00001065.14	No alias	(at2g29200 : 403.0) Encodes a member of the Arabidopsis...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR012940	NABP	304	730
IPR001313	Pumilio_RNA-bd_rpt	775	799
IPR001313	Pumilio_RNA-bd_rpt	732	762
IPR001313	Pumilio_RNA-bd_rpt	877	906
IPR001313	Pumilio_RNA-bd_rpt	803	828
IPR001313	Pumilio_RNA-bd_rpt	949	981
IPR001313	Pumilio_RNA-bd_rpt	998	1024
IPR001313	Pumilio_RNA-bd_rpt	842	873
IPR001313	Pumilio_RNA-bd_rpt	915	940

External Links

No external refs found!