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  5. Potri.009G038100

Potri.009G038100


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000512 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000512_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.009G038100
Cluster HCCA clusters: cluster_0144

Target Alias Description ECC score Gene Family Method Actions
A4A49_10908 No alias polygalacturonase 0.03 Orthogroups_2024-Update
At1g43080 No alias Glycoside hydrolase family 28 protein... 0.03 Orthogroups_2024-Update
At3g07830 No alias Pectin lyase-like superfamily protein... 0.03 Orthogroups_2024-Update
At5g48140 No alias At5g48140 [Source:UniProtKB/TrEMBL;Acc:Q9LUB8] 0.03 Orthogroups_2024-Update
GRMZM2G030265 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.001G377700 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 54 379
No external refs found!