Potri.009G059600

Description : RNA binding

Gene families : OG_42_0006440 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006440_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.009G059600
Cluster	HCCA clusters: cluster_0138

Target	Alias	Description	ECC score	Gene Family Method
Bradi3g48480	No alias	RNA binding	0.03	Orthogroups_2024-Update
Cre17.g702500	No alias	RNA binding	0.03	Orthogroups_2024-Update
Mp1g14850.1	No alias	Protein TAB2 homolog, chloroplastic OS=Arabidopsis...	0.04	Orthogroups_2024-Update
Pp1s103_117V6	No alias	tab2 protein	0.02	Orthogroups_2024-Update
Seita.1G229100.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
evm.model.tig00000622.21	No alias	(at3g08010 : 86.7) Encodes a chloroplast-localized...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR009472	Tab2-like	94	368

External Links

No external refs found!