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  5. Potri.009G067000

Potri.009G067000


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0010620 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010620_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.009G067000
Cluster HCCA clusters: cluster_0041

Target Alias Description ECC score Gene Family Method Actions
Glyma.07G234800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Seita.3G085000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G211100.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sopen12g034480 No alias PPR repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 140 166
IPR002885 Pentatricopeptide_repeat 644 666
IPR002885 Pentatricopeptide_repeat 371 400
IPR002885 Pentatricopeptide_repeat 343 370
IPR002885 Pentatricopeptide_repeat 168 193
IPR002885 Pentatricopeptide_repeat 471 500
IPR002885 Pentatricopeptide_repeat 710 737
IPR002885 Pentatricopeptide_repeat 544 568
IPR002885 Pentatricopeptide_repeat 268 311
IPR002885 Pentatricopeptide_repeat 570 617
No external refs found!