1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.009G084200

Potri.009G084200


Description : AGAMOUS-like 62


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.009G084200
Cluster HCCA clusters: cluster_0185

Target Alias Description ECC score Gene Family Method Actions
A4A49_14235 No alias developmental protein sepallata 1 0.03 Orthogroups_2024-Update
A4A49_15806 No alias developmental protein sepallata 1 0.03 Orthogroups_2024-Update
A4A49_26362 No alias floral homeotic protein globosa 0.03 Orthogroups_2024-Update
A4A49_27621 No alias agamous-like mads-box protein agl9 0.04 Orthogroups_2024-Update
At3g57230 No alias Agamous-like MADS-box protein AGL16... 0.03 Orthogroups_2024-Update
At4g22950 No alias Agamous-like MADS-box protein AGL19... 0.04 Orthogroups_2024-Update
At5g60910 No alias Agamous-like MADS-box protein AGL8... 0.04 Orthogroups_2024-Update
Brara.C01461.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Brara.D00221.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.F03360.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.05 Orthogroups_2024-Update
Glyma.03G019300 No alias AGAMOUS-like 20 0.02 Orthogroups_2024-Update
Glyma.05G163200 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.07G080900 No alias AGAMOUS-like 20 0.03 Orthogroups_2024-Update
Glyma.08G282500 No alias AGAMOUS-like 29 0.03 Orthogroups_2024-Update
Glyma.13G255200 No alias AGAMOUS-like 21 0.03 Orthogroups_2024-Update
HORVU3Hr1G095090.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G110470.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os02g07430 No alias OsMADS29 - MADS-box family gene with MIKCc type-box, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g39130 No alias OsMADS56 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g31748 No alias OsMADS20 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
PSME_00013164-RA No alias (at4g11880 : 108.0) AGL12, AGL14, and AGL17 are all... 0.02 Orthogroups_2024-Update
PSME_00050982-RA No alias (at4g11880 : 108.0) AGL12, AGL14, and AGL17 are all... 0.02 Orthogroups_2024-Update
Potri.002G079000 No alias K-box region and MADS-box transcription factor family protein 0.04 Orthogroups_2024-Update
Potri.004G131100 No alias AGAMOUS-like 29 0.03 Orthogroups_2024-Update
Potri.T101400 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
Pp1s118_161V6 No alias mikc* mads-box transcription factor 0.02 Orthogroups_2024-Update
Pp1s209_130V6 No alias mads-box transcription factor 0.01 Orthogroups_2024-Update
Pp1s267_56V6 No alias agamous-like protein 0.03 Orthogroups_2024-Update
Seita.1G273400.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.03 Orthogroups_2024-Update
Seita.9G561000.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.009G102200.2 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Solyc02g071730 No alias Tomato AGAMOUS 1 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 16 62
No external refs found!