1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.009G102500

Potri.009G102500


Description : Calcium-binding EF-hand family protein


Gene families : OG_42_0000644 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000644_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.009G102500
Cluster HCCA clusters: cluster_0113

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G106945 No alias EF hand calcium-binding protein family 0.03 Orthogroups_2024-Update
Glyma.02G133000 No alias Calcium-binding EF-hand family protein 0.02 Orthogroups_2024-Update
MA_194997g0010 No alias (at1g24620 : 137.0) EF hand calcium-binding protein... 0.03 Orthogroups_2024-Update
PSME_00046736-RA No alias (at1g24620 : 146.0) EF hand calcium-binding protein... 0.03 Orthogroups_2024-Update
Sobic.003G425500.1 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
Sopen01g001390 No alias EF hand 0.03 Orthogroups_2024-Update
Sopen02g014430 No alias EF hand 0.03 Orthogroups_2024-Update
Sopen06g026250 No alias EF hand 0.03 Orthogroups_2024-Update
evm.model.contig_2290.1 No alias (gnl|cdd|68872 : 94.0) no description available &... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 46 106
IPR002048 EF_hand_dom 116 178
No external refs found!