Potri.009G105300

Description : RNA-binding protein 47B

Gene families : OG_42_0000344 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000344_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.009G105300
Cluster	HCCA clusters: cluster_0023

Target	Alias	Description	ECC score	Gene Family Method
A4A49_23022	No alias	polyadenylate-binding protein rbp47	0.03	Orthogroups_2024-Update
Brara.C00877.1	No alias	regulatory factor *(RBP45/47) of mRNA stress granule formation	0.03	Orthogroups_2024-Update
GRMZM2G058098	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.03	Orthogroups_2024-Update
Glyma.07G210800	No alias	RNA-binding protein 47B	0.03	Orthogroups_2024-Update
Mp8g07840.1	No alias	mRNA-binding regulatory factor (RBP45/47)	0.03	Orthogroups_2024-Update
Pp1s391_69V6	No alias	nuclear acid binding	0.02	Orthogroups_2024-Update
Solyc10g005260	No alias	RNA-binding family protein (AHRD V3.3 *** A0A061FD24_THECC)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	316	380
IPR000504	RRM_dom	105	171
IPR000504	RRM_dom	197	267

External Links

No external refs found!