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  5. Sopen12g015190

Sopen12g015190


Description : hAT family C-terminal dimerisation region


Gene families : OG_42_0000225 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000225_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g015190
Cluster HCCA clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Glyma.05G009300 No alias BED zinc finger ;hAT family dimerisation domain 0.03 Orthogroups_2024-Update
LOC_Os03g52310 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g21420 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
Solyc04g012080 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR008906 HATC_C_dom 167 225
No external refs found!