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  5. Potri.009G120900

Potri.009G120900


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_42_0006127 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006127_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.009G120900
Cluster HCCA clusters: cluster_0132

Target Alias Description ECC score Gene Family Method Actions
419047 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Orthogroups_2024-Update
Bradi1g05110 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.04 Orthogroups_2024-Update
Brara.I04641.1 No alias pre-60S ribosomal subunit assembly factor *(NOP4) 0.03 Orthogroups_2024-Update
Cre02.g104650 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Orthogroups_2024-Update
GRMZM5G819452 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.04 Orthogroups_2024-Update
LOC_Os03g58720 No alias RNA recognition motif containing protein, putative, expressed 0.02 Orthogroups_2024-Update
Pp1s543_12V6 No alias rna binding motif protein 28 isoform 1 0.03 Orthogroups_2024-Update
Seita.9G051000.1 No alias pre-60S ribosomal subunit assembly factor *(NOP4) 0.06 Orthogroups_2024-Update
Solyc01g109990 No alias RNA-binding family protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen01g052180 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.04 Orthogroups_2024-Update
evm.model.contig_3690.3 No alias (at2g21440 : 145.0) RNA-binding (RRM/RBD/RNP motifs)... 0.02 Orthogroups_2024-Update
evm.model.tig00000144.75 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 270 339
IPR000504 RRM_dom 21 90
IPR000504 RRM_dom 491 551
No external refs found!