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  5. Potri.009G142000

Potri.009G142000


Description : basic chitinase


Gene families : OG_42_0000472 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.009G142000
Cluster HCCA clusters: cluster_0006

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g04060 No alias CHIT16 - Chitinase family protein precursor, expressed 0.04 Orthogroups_2024-Update
LOC_Os06g51060 No alias CHIT8 - Chitinase family protein precursor, expressed 0.02 Orthogroups_2024-Update
Mp2g24410.1 No alias Endochitinase CH25 OS=Brassica napus... 0.02 Orthogroups_2024-Update
Mp4g20450.1 No alias Endochitinase 1 OS=Theobroma cacao (sp|q41596|chi1_thecc : 229.0) 0.02 Orthogroups_2024-Update
Mp4g20470.1 No alias Basic endochitinase B OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Mp5g21830.1 No alias Endochitinase CH25 OS=Brassica napus... 0.02 Orthogroups_2024-Update
PSME_00012567-RA No alias (p51613|chib_vitvi : 374.0) Basic endochitinase... 0.04 Orthogroups_2024-Update
Pp1s134_173V6 No alias chitinase 0.02 Orthogroups_2024-Update
Solyc10g074460 No alias Chitinase (AHRD V3.3 *** B9VRK7_CAPAN) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA InterProScan predictions
BP GO:0006032 chitin catabolic process IEA InterProScan predictions
MF GO:0008061 chitin binding IEA InterProScan predictions
BP GO:0016998 cell wall macromolecule catabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 88 319
IPR001002 Chitin-bd_1 23 60
No external refs found!