1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.009G150100

Potri.009G150100


Description : zinc finger (C3HC4-type RING finger) family protein


Gene families : OG_42_0000330 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.009G150100
Cluster HCCA clusters: cluster_0014

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G141244 No alias zinc finger (C3HC4-type RING finger) family protein 0.02 Orthogroups_2024-Update
PSME_00042941-RA No alias (at3g53690 : 177.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
Potri.006G104700 No alias zinc finger (C3HC4-type RING finger) family protein 0.03 Orthogroups_2024-Update
Seita.6G169500.1 No alias plant-specific E3 ubiquitin ligase *(RSL/RFA) 0.03 Orthogroups_2024-Update
Sobic.002G212200.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc03g115920 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT3G14250.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002867 IBR_dom 378 450
IPR002867 IBR_dom 467 518
IPR002156 RNaseH_domain 168 288
No external refs found!