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  5. Potri.010G002300

Potri.010G002300


Description : ribosomal protein L3 plastid


Gene families : OG_42_0004366 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004366_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.010G002300
Cluster HCCA clusters: cluster_0071

Target Alias Description ECC score Gene Family Method Actions
Bradi2g08840 No alias ribosomal protein L3 plastid 0.04 Orthogroups_2024-Update
Brara.E02440.1 No alias component *(uL3m) of large mitoribosomal-subunit proteome 0.06 Orthogroups_2024-Update
Cre01.g022250 No alias ribosomal protein L3 plastid 0.05 Orthogroups_2024-Update
HORVU3Hr1G034240.1 No alias component *(uL3m) of large mitoribosomal-subunit proteome 0.07 Orthogroups_2024-Update
Kfl00167_0120 kfl00167_0120_v1.1 (at3g17465 : 335.0) encodes a putative L3 ribosomal... 0.02 Orthogroups_2024-Update
LOC_Os01g14830 No alias ribosomal protein L3, putative, expressed 0.03 Orthogroups_2024-Update
Pp1s49_269V6 No alias ribosomal protein l3 0.03 Orthogroups_2024-Update
Seita.5G061400.1 No alias component *(uL3m) of large mitoribosomal-subunit proteome 0.05 Orthogroups_2024-Update
Sobic.003G113400.1 No alias component *(uL3m) of large mitoribosomal-subunit proteome 0.03 Orthogroups_2024-Update
evm.model.tig00001574.8 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
evm.model.tig00001574.9 No alias (at3g17465 : 138.0) encodes a putative L3 ribosomal... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000597 Ribosomal_L3 175 257
No external refs found!