Potri.010G003000

Description : ATP binding cassette subfamily B4

Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.010G003000
Cluster	HCCA clusters: cluster_0163

Target	Alias	Description	ECC score	Gene Family Method
123915	No alias	P-glycoprotein 11	0.02	Orthogroups_2024-Update
419451	No alias	ABC transporter family protein	0.02	Orthogroups_2024-Update
Bradi2g47337	No alias	ATP binding cassette subfamily B4	0.04	Orthogroups_2024-Update
Bradi3g06577	No alias	ABC transporter family protein	0.02	Orthogroups_2024-Update
Brara.B03326.1	No alias	subfamily ABCB transporter	0.04	Orthogroups_2024-Update
Brara.I01830.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Glyma.13G118500	No alias	P-glycoprotein 11	0.03	Orthogroups_2024-Update
HORVU3Hr1G065240.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
HORVU3Hr1G068650.8	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
HORVU7Hr1G063020.3	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
LOC_Os01g74470	No alias	ABC transporter, ATP-binding protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os04g38570	No alias	multidrug resistance protein, putative, expressed	0.04	Orthogroups_2024-Update
LOC_Os05g47490	No alias	MDR-like ABC transporter, putative, expressed	0.02	Orthogroups_2024-Update
MA_10431815g0020	No alias	(at3g28860 : 1752.0) Belongs to the family of...	0.04	Orthogroups_2024-Update
MA_18863g0010	No alias	(at2g47000 : 769.0) Multidrug resistance P-glycoprotein...	0.03	Orthogroups_2024-Update
Mp2g11920.1	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
Mp3g11830.1	No alias	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.02	Orthogroups_2024-Update
PSME_00005534-RA	No alias	(at3g62150 : 1137.0) P-glycoprotein 21 (PGP21);...	0.03	Orthogroups_2024-Update
PSME_00018696-RA	No alias	(at3g62150 : 453.0) P-glycoprotein 21 (PGP21); FUNCTIONS...	0.02	Orthogroups_2024-Update
PSME_00021092-RA	No alias	(at3g28345 : 1204.0) ABC transporter family protein;...	0.02	Orthogroups_2024-Update
PSME_00023264-RA	No alias	(q6yuu5\|mdr_orysa : 1318.0) Putative multidrug...	0.05	Orthogroups_2024-Update
PSME_00024064-RA	No alias	(at3g28345 : 1431.0) ABC transporter family protein;...	0.02	Orthogroups_2024-Update
PSME_00031965-RA	No alias	(q6yuu5\|mdr_orysa : 1268.0) Putative multidrug...	0.03	Orthogroups_2024-Update
PSME_00033760-RA	No alias	(at2g47000 : 911.0) Multidrug resistance P-glycoprotein...	0.04	Orthogroups_2024-Update
PSME_00039058-RA	No alias	(q6yuu5\|mdr_orysa : 1225.0) Putative multidrug...	0.03	Orthogroups_2024-Update
PSME_00042040-RA	No alias	(at3g28345 : 1318.0) ABC transporter family protein;...	0.03	Orthogroups_2024-Update
Potri.001G165000	No alias	ATP binding cassette subfamily B19	0.03	Orthogroups_2024-Update
Potri.001G417600	No alias	ABC transporter family protein	0.04	Orthogroups_2024-Update
Potri.011G133800	No alias	P-glycoprotein 18	0.03	Orthogroups_2024-Update
Potri.018G141300	No alias	ABC transporter family protein	0.04	Orthogroups_2024-Update
Seita.5G031800.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Seita.5G283700.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Sobic.003G180400.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Sobic.004G073600.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Solyc03g093650	No alias	ABC transporter B family protein (AHRD V3.3 *** A0A072UBK0_MEDTR)	0.02	Orthogroups_2024-Update
Solyc12g098840	No alias	ABC transporter B family protein (AHRD V3.3 *** G7IBR0_MEDTR)	0.03	Orthogroups_2024-Update
Sopen09g003060	No alias	ABC transporter transmembrane region	0.02	Orthogroups_2024-Update
Sopen12g023550	No alias	ABC transporter	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	406	554
IPR003439	ABC_transporter-like	1068	1216
IPR011527	ABC1_TM_dom	63	338
IPR011527	ABC1_TM_dom	727	998

External Links

No external refs found!

Potri.010G003000

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation