Potri.010G008600

Description : Pectin lyase-like superfamily protein

Gene families : OG_42_0000259 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.010G008600
Cluster	HCCA clusters: cluster_0116

Target	Alias	Description	ECC score	Gene Family Method
At2g23900	No alias	Glycoside hydrolase family 28 protein/polygalacturonase...	0.03	Orthogroups_2024-Update
Bradi1g76890	No alias	Pectin lyase-like superfamily protein	0.03	Orthogroups_2024-Update
Brara.A01357.1	No alias	EC_3.2 glycosylase	0.03	Orthogroups_2024-Update
Brara.B03479.1	No alias	EC_3.2 glycosylase	0.03	Orthogroups_2024-Update
Brara.I04239.1	No alias	EC_3.2 glycosylase	0.03	Orthogroups_2024-Update
GRMZM2G174598	No alias	Pectin lyase-like superfamily protein	0.02	Orthogroups_2024-Update
Glyma.03G216800	No alias	Pectin lyase-like superfamily protein	0.03	Orthogroups_2024-Update
Glyma.10G016100	No alias	Pectin lyase-like superfamily protein	0.03	Orthogroups_2024-Update
LOC_Os05g50960	No alias	polygalacturonase, putative, expressed	0.02	Orthogroups_2024-Update
Mp7g13870.1	No alias	Probable polygalacturonase OS=Vitis vinifera...	0.02	Orthogroups_2024-Update
PSME_00010163-RA	No alias	(at4g33440 : 530.0) Pectin lyase-like superfamily...	0.03	Orthogroups_2024-Update
Seita.5G229400.1	No alias	EC_3.2 glycosylase	0.03	Orthogroups_2024-Update
Sobic.003G223100.1	No alias	EC_3.2 glycosylase	0.03	Orthogroups_2024-Update
Sopen05g028340	No alias	Glycosyl hydrolases family 28	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004650	polygalacturonase activity	IEA	InterProScan predictions
BP	GO:0005975	carbohydrate metabolic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000743	Glyco_hydro_28	5	274

External Links

No external refs found!