Description : Pectin lyase-like superfamily protein
Gene families : OG_42_0000259 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000259_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Populus release: Potri.010G008600 | |
Cluster | HCCA clusters: cluster_0116 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At2g23900 | No alias | Glycoside hydrolase family 28 protein/polygalacturonase... | 0.03 | Orthogroups_2024-Update | |
Bradi1g76890 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Brara.A01357.1 | No alias | EC_3.2 glycosylase | 0.03 | Orthogroups_2024-Update | |
Brara.B03479.1 | No alias | EC_3.2 glycosylase | 0.03 | Orthogroups_2024-Update | |
Brara.I04239.1 | No alias | EC_3.2 glycosylase | 0.03 | Orthogroups_2024-Update | |
GRMZM2G174598 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.03G216800 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.10G016100 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
LOC_Os05g50960 | No alias | polygalacturonase, putative, expressed | 0.02 | Orthogroups_2024-Update | |
Mp7g13870.1 | No alias | Probable polygalacturonase OS=Vitis vinifera... | 0.02 | Orthogroups_2024-Update | |
PSME_00010163-RA | No alias | (at4g33440 : 530.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
Seita.5G229400.1 | No alias | EC_3.2 glycosylase | 0.03 | Orthogroups_2024-Update | |
Sobic.003G223100.1 | No alias | EC_3.2 glycosylase | 0.03 | Orthogroups_2024-Update | |
Sopen05g028340 | No alias | Glycosyl hydrolases family 28 | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004650 | polygalacturonase activity | IEA | InterProScan predictions |
BP | GO:0005975 | carbohydrate metabolic process | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000743 | Glyco_hydro_28 | 5 | 274 |
No external refs found! |