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  5. Potri.010G042500

Potri.010G042500


Description : RNA-binding CRS1 / YhbY (CRM) domain-containing protein


Gene families : OG_42_0001286 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001286_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.010G042500
Cluster HCCA clusters: cluster_0036

Target Alias Description ECC score Gene Family Method Actions
62891 No alias RNA-binding CRS1 / YhbY (CRM) domain-containing protein 0.04 Orthogroups_2024-Update
Bradi2g12140 No alias RNA-binding CRS1 / YhbY (CRM) domain-containing protein 0.04 Orthogroups_2024-Update
Bradi2g13640 No alias RNA-binding CRS1 / YhbY (CRM) domain-containing protein 0.08 Orthogroups_2024-Update
LOC_Os01g21990 No alias CRS2-associated factor 2, chloroplast precursor,... 0.03 Orthogroups_2024-Update
PSME_00014379-RA No alias (at1g23400 : 110.0) Promotes the splicing of chloroplast... 0.03 Orthogroups_2024-Update
Seita.5G154500.1 No alias component *(CAF) of CRS2-CAF plastidial RNA splicing... 0.05 Orthogroups_2024-Update
Seita.9G384400.1 No alias component *(CAF) of CRS2-CAF plastidial RNA splicing... 0.07 Orthogroups_2024-Update
Sobic.003G151500.1 No alias component *(CAF) of CRS2-CAF plastidial RNA splicing... 0.04 Orthogroups_2024-Update
Sobic.007G185700.1 No alias component *(CAF) of CRS2-CAF plastidial RNA splicing... 0.05 Orthogroups_2024-Update
Solyc05g018240 No alias GSVIVT00005628001, HT7 (AHRD V3.3 *** A0A0A9GN13_ARUDO) 0.03 Orthogroups_2024-Update
Sopen05g015000 No alias CRS1 / YhbY (CRM) domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001890 RNA-binding_CRM 311 394
IPR001890 RNA-binding_CRM 203 276
No external refs found!