Potri.010G052000

Description : photosystem II BY

Gene families : OG_42_0005644 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005644_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.010G052000
Cluster	HCCA clusters: cluster_0107

Target	Alias	Description	ECC score	Gene Family Method
Brara.B01738.1	No alias	component *(PsbY) of PS-II complex	0.03	Orthogroups_2024-Update
Glyma.05G172300	No alias	photosystem II BY	0.04	Orthogroups_2024-Update
Glyma.11G245400	No alias	photosystem II BY	0.04	Orthogroups_2024-Update
Kfl00370_0100	kfl00370_0100_v1.1	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
Seita.6G082000.1	No alias	component *(PsbY) of PS-II complex	0.04	Orthogroups_2024-Update
Sobic.007G023300.1	No alias	component *(PsbY) of PS-II complex	0.03	Orthogroups_2024-Update
Solyc10g077120	No alias	Photosystem II core complex proteins psbY (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Sopen10g028800	No alias	Photosystem II protein Y (PsbY)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	InterProScan predictions
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	IEA	InterProScan predictions
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
MF	GO:0030145	manganese ion binding	IEA	InterProScan predictions
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044436	thylakoid part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR009388	PSII_PsbY	161	193
IPR009388	PSII_PsbY	89	121

External Links

No external refs found!