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  5. Sopen12g017150

Sopen12g017150


Description : Retrotransposon gag protein


Gene families : OG_42_0001348 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001348_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g017150
Cluster HCCA clusters: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Sopen08g007860 No alias Integrase core domain 0.03 Orthogroups_2024-Update
Sopen08g010440 No alias Integrase core domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 103 199
IPR000477 RT_dom 493 561
No external refs found!