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  5. Potri.010G181400

Potri.010G181400


Description : dicer-like 2


Gene families : OG_42_0000292 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000292_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.010G181400
Cluster HCCA clusters: cluster_0060

Target Alias Description ECC score Gene Family Method Actions
Bradi3g29287 No alias dicer-like 3 0.04 Orthogroups_2024-Update
Brara.J00078.1 No alias endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... 0.05 Orthogroups_2024-Update
GRMZM2G413853 No alias dicer-like 3 0.03 Orthogroups_2024-Update
LOC_Os06g25250 No alias endoribonuclease Dicer, putative, expressed 0.02 Orthogroups_2024-Update
Pp1s30_297V6 No alias dicer-like protein 0.03 Orthogroups_2024-Update
Sopen07g025140 No alias Ribonuclease III domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0004525 ribonuclease III activity IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006396 RNA processing IEA InterProScan predictions
MF GO:0016787 hydrolase activity IEA InterProScan predictions
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006935 Helicase/UvrB_N 24 189
IPR000999 RNase_III_dom 1192 1303
IPR000999 RNase_III_dom 1002 1120
IPR005034 Dicer_dimerisation_dom 561 640
IPR003100 PAZ_dom 833 959
IPR001650 Helicase_C 374 491
No external refs found!