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  5. Potri.010G209700

Potri.010G209700


Description : phragmoplastin interacting protein 1


Gene families : OG_42_0005060 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005060_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.010G209700
Cluster HCCA clusters: cluster_0009

Target Alias Description ECC score Gene Family Method Actions
Bradi2g37420 No alias phragmoplastin interacting protein 1 0.03 Orthogroups_2024-Update
Cre10.g466450 No alias chloroplast RNA-binding protein 29 0.03 Orthogroups_2024-Update
Glyma.20G098800 No alias phragmoplastin interacting protein 1 0.04 Orthogroups_2024-Update
LOC_Os03g03140 No alias RNA recognition motif containing protein, putative, expressed 0.03 Orthogroups_2024-Update
Pp1s255_12V6 No alias T26I12.220; RNA recognition motif (RRM)-containing... 0.03 Orthogroups_2024-Update
Sobic.009G016400.1 No alias phragmoplastin-interacting factor *(PHIP1) 0.06 Orthogroups_2024-Update
evm.model.contig_433.9 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
evm.model.tig00000441.24 No alias (p28644|roc1_spiol : 96.3) 28 kDa ribonucleoprotein,... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 66 134
IPR001878 Znf_CCHC 187 204
No external refs found!