Potri.010G234800

Description : RNA-binding (RRM/RBD/RNP motifs) family protein

Gene families : OG_42_0004683 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004683_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.010G234800
Cluster	HCCA clusters: cluster_0118

Target	Alias	Description	ECC score	Gene Family Method
Brara.B00148.1	No alias	pre-60S ribosomal subunit assembly factor *(NOP15)	0.06	Orthogroups_2024-Update
Brara.J02725.1	No alias	pre-60S ribosomal subunit assembly factor *(NOP15)	0.04	Orthogroups_2024-Update
Cre08.g368500	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.03	Orthogroups_2024-Update
GRMZM2G056350	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.02	Orthogroups_2024-Update
Mp6g13260.1	No alias	pre-60S ribosomal subunit assembly factor (NOP15)	0.02	Orthogroups_2024-Update
Pp1s198_53V6	No alias	ribosomal biogenesis protein gar2	0.03	Orthogroups_2024-Update
Sobic.003G424800.1	No alias	pre-60S ribosomal subunit assembly factor *(NOP15)	0.07	Orthogroups_2024-Update
evm.model.contig_496.11	No alias	(at5g04600 : 93.2) RNA-binding (RRM/RBD/RNP motifs)...	0.03	Orthogroups_2024-Update
evm.model.tig00000137.5	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	58	125

External Links

No external refs found!