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  5. Potri.010G241300

Potri.010G241300


Description : pentatricopeptide (PPR) repeat-containing protein


Gene families : OG_42_0006730 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006730_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Populus release: Potri.010G241300
Cluster HCCA clusters: cluster_0036

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g58780 No alias pentatricopeptide repeat protein, putative, expressed 0.03 Orthogroups_2024-Update
Seita.3G009400.1 No alias trans-splicing factor *(PPR4) 0.03 Orthogroups_2024-Update
Sobic.006G273400.1 No alias trans-splicing factor *(PPR4) 0.03 Orthogroups_2024-Update
Solyc11g006680 No alias Pentatricopeptide repeat-containing protein, putative... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 674 705
IPR002885 Pentatricopeptide_repeat 773 826
IPR002885 Pentatricopeptide_repeat 436 465
IPR002885 Pentatricopeptide_repeat 299 325
IPR002885 Pentatricopeptide_repeat 579 605
IPR002885 Pentatricopeptide_repeat 401 430
IPR000504 RRM_dom 152 224
IPR002885 Pentatricopeptide_repeat 537 577
IPR002885 Pentatricopeptide_repeat 713 761
IPR002885 Pentatricopeptide_repeat 327 376
IPR002885 Pentatricopeptide_repeat 467 516
IPR002885 Pentatricopeptide_repeat 607 655
No external refs found!