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  5. Potri.011G011100

Potri.011G011100


Description : KNOX/ELK homeobox transcription factor


Gene families : OG_42_0000234 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000234_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.011G011100
Cluster HCCA clusters: cluster_0160

Target Alias Description ECC score Gene Family Method Actions
A4A49_37821 No alias homeobox protein knotted-1-like let12 0.03 Orthogroups_2024-Update
At5g25220 No alias KNAT3 [Source:UniProtKB/TrEMBL;Acc:A0A178U9D1] 0.03 Orthogroups_2024-Update
Bradi1g76970 No alias KNOTTED-like homeobox of Arabidopsis thaliana 7 0.03 Orthogroups_2024-Update
Brara.B01915.1 No alias KNOX-type transcription factor 0.03 Orthogroups_2024-Update
Brara.H02211.1 No alias KNOX-type transcription factor 0.03 Orthogroups_2024-Update
Brara.I01459.1 No alias KNOX-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.02G036900 No alias KNOTTED1-like homeobox gene 6 0.03 Orthogroups_2024-Update
Glyma.14G114467 No alias KNOTTED1-like homeobox gene 4 0.03 Orthogroups_2024-Update
Glyma.18G083100 No alias KNOTTED1-like homeobox gene 5 0.03 Orthogroups_2024-Update
LOC_Os05g03884 No alias homeobox protein knotted-1-like 6, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00035381-RA No alias (p46609|osh1_orysa : 118.0) Homeobox protein OSH1 -... 0.02 Orthogroups_2024-Update
Potri.004G004700 No alias KNOX/ELK homeobox transcription factor 0.05 Orthogroups_2024-Update
Potri.012G087100 No alias KNOTTED1-like homeobox gene 6 0.03 Orthogroups_2024-Update
Sobic.001G106200.1 No alias KNOX-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G144200.1 No alias KNOX-type transcription factor 0.02 Orthogroups_2024-Update
Sopen05g001110 No alias KNOX2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR008422 Homeobox_KN_domain 295 334
IPR005540 KNOX1 121 159
IPR005539 ELK_dom 255 276
IPR005541 KNOX2 172 218
No external refs found!