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  5. Solyc03g005860

Solyc03g005860


Description : ABC transporter B family protein (AHRD V3.3 *** G7ILW7_MEDTR)


Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g005860
Cluster HCCA clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
123915 No alias P-glycoprotein 11 0.03 Orthogroups_2024-Update
139408 No alias P-glycoprotein 20 0.02 Orthogroups_2024-Update
230688 No alias ATP binding cassette subfamily B19 0.02 Orthogroups_2024-Update
92485 No alias ATP binding cassette subfamily B19 0.02 Orthogroups_2024-Update
A4A49_01823 No alias putative abc transporter b family member 8 0.02 Orthogroups_2024-Update
At3g28860 No alias ABC transporter B family member 19... 0.04 Orthogroups_2024-Update
Bradi1g72517 No alias ATP binding cassette subfamily B19 0.03 Orthogroups_2024-Update
Bradi2g11210 No alias P-glycoprotein 21 0.02 Orthogroups_2024-Update
Bradi2g47360 No alias P-glycoprotein 11 0.03 Orthogroups_2024-Update
Bradi2g47400 No alias ATP binding cassette subfamily B4 0.04 Orthogroups_2024-Update
Cre17.g725200 No alias P-glycoprotein 21 0.02 Orthogroups_2024-Update
GRMZM2G004748 No alias P-glycoprotein 2 0.04 Orthogroups_2024-Update
Glyma.09G206300 No alias P-glycoprotein 2 0.04 Orthogroups_2024-Update
Glyma.16G078100 No alias ABC transporter family protein 0.02 Orthogroups_2024-Update
Glyma.17G041300 No alias ATP binding cassette subfamily B4 0.03 Orthogroups_2024-Update
Glyma.19G016700 No alias ABC transporter family protein 0.02 Orthogroups_2024-Update
Kfl00008_0360 kfl00008_0360_v1.1 (at1g02520 : 1200.0) P-glycoprotein 11 (PGP11);... 0.02 Orthogroups_2024-Update
LOC_Os08g05710 No alias ABC transporter, ATP-binding protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_83806g0010 No alias (q6yuu5|mdr_orysa : 1360.0) Putative multidrug... 0.03 Orthogroups_2024-Update
PSME_00006519-RA No alias (at3g28345 : 1327.0) ABC transporter family protein;... 0.03 Orthogroups_2024-Update
PSME_00023263-RA No alias (q6yuu5|mdr_orysa : 1044.0) Putative multidrug... 0.04 Orthogroups_2024-Update
PSME_00023264-RA No alias (q6yuu5|mdr_orysa : 1318.0) Putative multidrug... 0.02 Orthogroups_2024-Update
PSME_00023484-RA No alias (at2g36910 : 1766.0) Belongs to the family of... 0.04 Orthogroups_2024-Update
PSME_00030174-RA No alias (at2g47000 : 1538.0) Multidrug resistance ... 0.03 Orthogroups_2024-Update
PSME_00031965-RA No alias (q6yuu5|mdr_orysa : 1268.0) Putative multidrug... 0.04 Orthogroups_2024-Update
PSME_00039058-RA No alias (q6yuu5|mdr_orysa : 1225.0) Putative multidrug... 0.03 Orthogroups_2024-Update
Potri.001G139700 No alias P-glycoprotein 2 0.03 Orthogroups_2024-Update
Potri.002G019600 No alias P-glycoprotein 13 0.03 Orthogroups_2024-Update
Potri.003G094400 No alias P-glycoprotein 2 0.03 Orthogroups_2024-Update
Potri.017G085000 No alias ABC transporter family protein 0.03 Orthogroups_2024-Update
Potri.018G141400 No alias ABC transporter family protein 0.03 Orthogroups_2024-Update
Seita.1G280600.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Seita.3G160100.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Seita.5G302200.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Sobic.007G163800.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Solyc07g018130 No alias ABC transporter B family protein (AHRD V3.3 *** G7JF16_MEDTR) 0.03 Orthogroups_2024-Update
Sopen06g004020 No alias ABC transporter transmembrane region 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006810 transport IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003995 acyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0004594 pantothenate kinase activity IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0006897 endocytosis IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0015937 coenzyme A biosynthetic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0098657 import into cell IEP Predicted GO
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 694 1033
IPR011527 ABC1_TM_dom 26 297
IPR003439 ABC_transporter-like 1104 1253
IPR003439 ABC_transporter-like 368 515
No external refs found!