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  5. Sopen12g018890

Sopen12g018890


Description : Transposase family tnp2


Gene families : OG_42_0003771 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003771_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g018890
Cluster HCCA clusters: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
Solyc10g038070 No alias No description available 0.03 Orthogroups_2024-Update
Sopen01g005650 No alias Plant transposase (Ptta/En/Spm family) 0.04 Orthogroups_2024-Update
Sopen03g008790 No alias Plant transposase (Ptta/En/Spm family) 0.04 Orthogroups_2024-Update
Sopen07g020520 No alias Plant transposase (Ptta/En/Spm family) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR029480 Transpos_assoc 58 122
IPR004252 Probable_transposase_24 465 604
IPR004242 Transposase_21 335 381
No external refs found!